Legga wrote:
"Thanks for the reply. I was mostly curious about the claim that emotions are the primary explanation for negative thoughts among depressed people. I haven't read neuroscience, but I know that people connect thoughts according to context."
Now I did not claim that emotions were the primary explanation for negative thoughts among depressed people. My exact wording was: "Why do depressed people constantly have negative thoughts? Because their limbic systems emanate depressed moods." You are correct in that people connect thoughts according to context.
I get the idea, it could be an erroneous one, that you have the belief that it is really context which is the key for the depressed thoughts. And often it is (but not always, as I will show)! But most importantly, what I was saying is that the negative mood "emanates" or "radiates" from the limbic system, which then affects the part of our brain responsible for our rationality (the cortex). Now I am using lots of terms here, so this may be an appropriate time for an image to illustrate what I'm talking about:

And as I also said: "Is there a feedback system between thoughts and emotions? Yes." I will show a little bit about that too. But here is some research. I've made bold the parts that I thought were especially relevant. Many of the brain structures may be unfamiliar to you, but I think you should be able to get the gist of what is being said just fine without knowing what a "nucleus accumbens" is.
This 1999 research paper abstract sums up what I've been talking about beautifully. It also had a good sample size, but the process by which samples were chosen is rather complicated. I've omitted discussion of the samples in this reply, but you are free to have a look yourself. That is a link to the complete research paper.
OBJECTIVE: Theories of human behavior from Plato to Freud have repeatedly emphasized links between emotion and reason, a relationship now commonly attributed to pathways connecting phylogenetically “old†and “new†brain regions. Expanding on this theory, this study examined functional interactions between specific limbic and neocortical regions accompanying normal and disease-associated shifts in negative mood state. METHOD: Regions of concordant functional change accompanying provocation of transient sadness in healthy volunteers and resolution of chronic dysphoric symptoms in depressed patients were examined with two positron emission tomography techniques: [15O]water and [18F]fluorodeoxyglucose, respectively. RESULTS: With sadness, increases in limbic-paralimbic blood flow (subgenual cingulate, anterior insula) and decreases in neocortical regions (right dorsolateral prefrontal, inferior parietal) were identified. With recovery from depression, the reverse pattern, involving the same regions, was seen—limbic metabolic decreases and neocortical increases. A significant inverse correlation between subgenual cingulate and right dorsolateral prefrontal activity was also demonstrated in both conditions. CONCLUSIONS: Reciprocal changes involving subgenual cingulate and right prefrontal cortex occur with both transient and chronic changes in negative mood. The presence and maintenance of functional reciprocity between these regions with shifts in mood in either direction suggests that these regional interactions are obligatory and probably mediate the well-recognized relationships between mood and attention seen in both normal and pathological conditions. The bidirectional nature of this limbic-cortical reciprocity provides additional evidence of potential mechanisms mediating cognitive (“top-downâ€), pharmacological (mixed), and surgical (“bottom-upâ€) treatments of mood disorders such as depression.
Another 1999 study that found correlations between limbic structures and mood disorders. Unfortunately, the sample size wasn't the greatest:
"Volumes of basal ganglia in postmortem brains of 8 patients with mood disorders and 8 control subjects without neuropsychiatric disorder were determined."
"Results of the present postmortem study confirm and specify findings of basal ganglia abnormalities reported from CT or MRI studies. Neuroimaging studies have shown that structural abnormalities exist in basal ganglia of patients with mood disorders. In nonelderly patients with unipolar depression, controlled MRI studies found at least a trend for reduced volumes of the caudate and the putaminal complex. However, this seems not to be the case for bipolar disorder."
"This finding may have pathophysiological relevance, since the nucleus accumbens is part of the ventral striatum and thereby belongs to the limbic nuclei. There is a reciprocal projection between the nucleus accumbens and the ventral pallidum, which share common neuromodulators such as γ-aminobutyric acid and opioids. Furthermore, the nucleus accumbens is the terminal of the mesolimbic dopaminergic projection from the ventral tegmental area. These two pathways are known to be relevant to rewarding effects and locomotion. Moreover, there exist afferents to the nucleus accumbens from cortical and subcortical limbic structures such as the entorhinal cortex, prelimbic and infralimbic cortices, the anterior cingulate, the hippocampus, the mesencephalon including the dorsal raphe nucleus, the basal amygdala, and the lateral hypothalamus. For this reason the nucleus accumbens is believed to be a pivotal structure at the interface of the limbic system and the basal ganglia and might be associated with psychic functions like mood and motivation."
From this abstract of a 2014 study:
"Treatment-resistant depression is a common clinical occurrence among patients with major depressive disorder (MDD), but its neurobiology is poorly understood. We used data collected as part of routine clinical care to study white matter integrity of the brain's limbic system and its association to treatment response."
"Treatment outcome was determined by review of clinical charts. MDD patients (n = 29 non-remitters, n = 26 partial-remitters, and n = 37 full-remitters), and healthy control subjects (n = 58) were analyzed for fractional anisotropy (FA) of the fornix and cingulum bundle. Results. Failure to achieve remission was associated with lower FA among MDD patients, statistically significant for the medial body of the fornix. Moreover, global and regional-selective age-related FA decline was most pronounced in patients with treatment-refractory, non-remitted depression. Conclusions. These findings suggest that specific brain microstructural white matter abnormalities underlie persistent, treatment-resistant depression. They also demonstrate the feasibility of investigating white matter integrity in psychiatric populations using legacy data."
From a 2004 study:
Discussion of the sample population: "Data were obtained from either the left or right thalamus of both male and female subjects who had been diagnosed with major depressive disorder, bipolar disorder, schizophrenia, or no psychopathology. The collection and diagnosis of subjects in the Stanley Foundation Brain Bank has been described in detail previously (14). Sixty specimens (15/group) were originally obtained. However, some of the specimens were not counted because either they could not be appropriately stained (N=3), they had missing tissue (anteroventral/anteromedial: N=5; mediodorsal: N=8), or they exhibited evidence of gross thalamic pathology (congenital defect in the region of the medial thalamus, plaque-filled lesion in the globus pallidus, loss of staining in anteroventral neurons, or neuronal hyperpigmentation in surrounding tissue). Because of the differing number of specimens affected by missing tissue, there are different numbers of subjects in the anteroventral/anteromedial (N=49) and mediodorsal (N=46) analyses."
Still a decent sample size, I think.
"There were significantly more neurons in the mediodorsal (37%) and anteroventral/anteromedial (26%) nuclei in subjects with major depressive disorder relative to the nonpsychiatric comparison subjects. Neuron numbers and volumes in these limbic thalamic nuclei were normal in the schizophrenia and bipolar subjects. CONCLUSIONS: The data indicate that there is an elevation in total neuron number in the limbic thalamus that is specific for major depressive disorder. This represents the first report of a neuropsychiatric disorder being associated with an increase in total regional neuron number. The present findings, along with recent data, indicate that significant anatomical and functional abnormalities are present in limbic circuits in major depressive disorder."